STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77643.1TonB-dependent receptor; KEGG: mct:MCR_0690 8.2e-07 tbpA; transferrin binding protein A TbpA K16087; Psort location: OuterMembrane, score: 10.00. (666 aa)    
Predicted Functional Partners:
KXB78993.1
TonB-dependent receptor.
 
 
 
 0.746
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
   
 
 0.685
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
 
 0.685
KXB77314.1
Hypothetical protein; KEGG: snc:HMPREF0837_11767 2.7e-08 murE2; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
     0.619
KXB78005.1
Hypothetical protein; KEGG: pha:PSHAa0816 0.0011 partitioning protein A K03496; Psort location: Cytoplasmic, score: 8.96.
  
 
   0.564
KXB79146.1
KEGG: ccm:Ccan_17350 9.8e-83 Sporulation initiation inhibitor protein soj K03496; Psort location: CytoplasmicMembrane, score: 7.88.
    
   0.483
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
    
   0.483
KXB77275.1
Hypothetical protein; KEGG: med:MELS_0445 0.0022 nitrogenase iron protein; K02588 nitrogenase iron protein NifH.
    
   0.483
KXB76566.1
Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96.
    
   0.483
KXB75598.1
Hypothetical protein.
    
   0.483
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.