STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77621.1Putative DNA-binding protein. (142 aa)    
Predicted Functional Partners:
KXB74319.1
Hypothetical protein; KEGG: sgn:SGRA_3959 0.00020 glycosyl transferase family protein; Psort location: Periplasmic, score: 9.84.
 
     0.751
KXB78066.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.727
KXB74321.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.708
KXB78296.1
LysM domain protein; KEGG: ccm:Ccan_15880 1.3e-20 putative lysozyme.
 
    0.704
KXB80829.1
Hypothetical protein.
  
     0.672
KXB79154.1
Hypothetical protein; KEGG: zga:zobellia_4408 0.0034 thiol-disulfide oxidoreductase.
  
     0.633
KXB78118.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5890 3.0e-26 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
 
     0.619
KXB74998.1
Hypothetical protein.
  
     0.612
KXB80394.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.603
KXB74166.1
Hypothetical protein; KEGG: tva:TVAG_387410 1.2e-06 viral A-type inclusion protein; K02331 DNA polymerase phi subunit.
  
     0.597
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.