STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77627.1Hypothetical protein; KEGG: phu:Phum_PHUM451890 2.4e-10 leucine-rich transmembrane protein, putative. (504 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
   
   0.686
KXB77624.1
Hypothetical protein.
  
   0.604
KXB77626.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
       0.561
KXB77628.1
Hypothetical protein.
      
0.523
KXB78999.1
Hypothetical protein.
   
   0.470
KXB79003.1
Hypothetical protein.
   
   0.470
KXB78470.1
Hypothetical protein.
   
   0.470
KXB78240.1
SusD family protein.
   
   0.470
KXB77719.1
Hypothetical protein.
   
   0.470
KXB77312.1
Hypothetical protein.
   
   0.470
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.