STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77570.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (559 aa)    
Predicted Functional Partners:
KXB77569.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.754
KXB77568.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 8.96.
       0.683
KXB79767.1
Phage tail tape measure protein, TP901 family; KEGG: edi:EDI_175070 4.0e-13 myosin-2 heavy chain, non muscle K10352; Psort location: OuterMembrane, score: 8.97.
  
     0.587
KXB77567.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.566
KXB74565.1
Tape measure domain protein; KEGG: edi:EDI_341030 2.5e-21 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.526
KXB79702.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.482
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.