STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77443.1Hypothetical protein; KEGG: ccm:Ccan_20960 0.0070 S-adenosyl-methyltransferase MraW; Psort location: Cytoplasmic, score: 8.96. (178 aa)    
Predicted Functional Partners:
KXB77444.1
KEGG: pdn:HMPREF9137_0791 0. penicillin-binding protein, transpeptidase domain-containing protein; K03587 cell division protein FtsI (penicillin-binding protein 3); Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.908
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.849
KXB74186.1
Hypothetical protein.
  
     0.772
KXB80092.1
Hypothetical protein; KEGG: pkn:PKH_011660 0.0030 mannose-6-phosphate isomerase.
  
     0.767
KXB76000.1
Tetratricopeptide repeat protein.
  
     0.766
KXB74998.1
Hypothetical protein.
  
     0.766
KXB74321.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
KXB78297.1
Hypothetical protein.
  
     0.756
KXB80100.1
Sporulation and cell division repeat protein; KEGG: bpu:BPUM_1632 5.3e-07 cwlC; N-acetylmuramoyl-L-alanine amidase K01448.
  
     0.755
KXB76234.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.