STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77458.1Hypothetical protein; KEGG: cco:CCC13826_2309 3.9e-47 hydrogenase-4 component C; Psort location: Cytoplasmic, score: 8.96. (280 aa)    
Predicted Functional Partners:
KXB77459.1
Putative hemolysin; KEGG: pit:PIN17_A0842 9.7e-147 putative cystathionine beta-lyase PatB; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 9.97.
     0.979
KXB79757.1
Hypothetical protein; KEGG: cla:Cla_0033 0.0025 MoxR/RavA-like ATPase; K03924 MoxR-like ATPase; Psort location: Cytoplasmic, score: 8.96.
  
     0.556
KXB77457.1
Arylsulfatase; KEGG: pdn:HMPREF9137_0912 4.7e-225 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.465
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
  
  0.437
KXB78262.1
MATE efflux family protein; KEGG: rcp:RCAP_rcc02680 1.2e-20 mdtK; multidrug resistance protein MdtK K03327; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.428
secF
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
    
  0.410
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.