STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77467.1HAD hydrolase, family IB; KEGG: tdn:Suden_1221 2.3e-28 phosphoserine phosphatase; Psort location: Cytoplasmic, score: 9.97. (198 aa)    
Predicted Functional Partners:
KXB77468.1
Prenyltransferase, UbiA family; KEGG: ctc:CTC01291 5.8e-46 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UbiA prenyltransferase family.
     0.980
KXB77466.1
GtrA-like protein; Psort location: CytoplasmicMembrane, score: 9.46.
      0.950
KXB77469.1
Acyltransferase; KEGG: rdn:HMPREF0733_11417 8.0e-10 mdmB; acyltransferase MdmB; Psort location: CytoplasmicMembrane, score: 10.00.
       0.849
KXB77470.1
Acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.849
KXB77471.1
Arylsulfatase; KEGG: pmz:HMPREF0659_A5230 3.1e-212 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.828
KXB77464.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
serC
Putative phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.672
KXB77465.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.658
KXB77463.1
KEGG: pmz:HMPREF0659_A5238 4.8e-106 glycosyltransferase, group 2 family protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.646
KXB78792.1
KEGG: pmz:HMPREF0659_A5654 1.5e-175 phospholipase D domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.643
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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