STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77485.1TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0035 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00. (673 aa)    
Predicted Functional Partners:
KXB77486.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C0457 2.4e-17 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.853
KXB77487.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
       0.779
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
   0.616
KXB78132.1
Hypothetical protein.
  
 
   0.570
KXB78993.1
TonB-dependent receptor.
  
   0.564
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
   0.564
KXB75621.1
Hypothetical protein.
    
   0.560
KXB75596.1
Hypothetical protein.
    
   0.560
KXB77488.1
Peptidase dimerization domain protein; KEGG: bsa:Bacsa_0137 1.1e-168 Beta-Ala-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
       0.435
KXB78281.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.93.
  
    0.432
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.