STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77487.1Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (458 aa)    
Predicted Functional Partners:
KXB77486.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C0457 2.4e-17 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.868
KXB79590.1
KEGG: pmz:HMPREF0659_A5198 6.5e-141 hemN; coproporphyrinogen dehydrogenase K02495; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.835
KXB77485.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0035 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
       0.779
KXB81932.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.607
KXB81391.1
comF family protein; KEGG: zga:zobellia_1422 4.5e-30 phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
    0.590
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.523
KXB77488.1
Peptidase dimerization domain protein; KEGG: bsa:Bacsa_0137 1.1e-168 Beta-Ala-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
     
 0.513
KXB79006.1
UDP-glucose 4-epimerase; KEGG: pmz:HMPREF0659_A6741 6.5e-157 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.455
KXB79955.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
  0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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