Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
KXB77487.1Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (458 aa)    
Predicted Functional Partners:
KXB79590.1
KEGG: pmz:HMPREF0659_A5198 6.5e-141 hemN; coproporphyrinogen dehydrogenase K02495; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.914
KXB77486.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C0457 2.4e-17 ampG; muropeptide transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.842
KXB77485.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0035 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 10.00.
       0.739
KXB81391.1
comF family protein; KEGG: zga:zobellia_1422 4.5e-30 phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
    0.601
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.583
KXB81932.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.522
KXB77488.1
Peptidase dimerization domain protein; KEGG: bsa:Bacsa_0137 1.1e-168 Beta-Ala-His dipeptidase; Psort location: Cytoplasmic, score: 8.96.
     
 0.507
KXB79006.1
UDP-glucose 4-epimerase; KEGG: pmz:HMPREF0659_A6741 6.5e-157 galE; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.465
KXB77796.1
KEGG: bsa:Bacsa_1195 1.0e-158 UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.96.
    
  0.450
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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