Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB77488.1Peptidase dimerization domain protein; KEGG: bsa:Bacsa_0137 1.1e-168 Beta-Ala-His dipeptidase; Psort location: Cytoplasmic, score: 8.96. (453 aa)    
Predicted Functional Partners:
KXB77048.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.838
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
 
 0.684
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
  
 0.609
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.603
KXB79153.1
Dihydroorotase; KEGG: pmz:HMPREF0659_A5999 3.6e-156 amidohydrolase family protein; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.574
KXB77489.1
Arylsulfatase; KEGG: pdn:HMPREF9137_0720 2.1e-128 arylsulfatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.550
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
 0.546
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.541
KXB81941.1
KEGG: bth:BT_0768 1.8e-35 hypothetical protein; K02619 4-amino-4-deoxychorismate lyase; Psort location: Cytoplasmic, score: 8.96.
  
 0.521
KXB78133.1
KEGG: pdn:HMPREF9137_1664 8.7e-162 ilvE; branched-chain-amino-acid transaminase K00826; Psort location: Cytoplasmic, score: 9.97.
  
 0.521
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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