STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77504.1SNARE-like domain protein; KEGG: gtn:GTNG_0171 3.1e-08 alkaline phosphatase-like protein; K01077 alkaline phosphatase; Psort location: CytoplasmicMembrane, score: 9.82. (151 aa)    
Predicted Functional Partners:
KXB77503.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.863
purD
KEGG: pmz:HMPREF0659_A6752 2.4e-175 purD; phosphoribosylamine--glycine ligase K01945; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
  
    0.856
KXB77501.1
KEGG: pmz:HMPREF0659_A6751 0. peptidase, S9A/B/C family, catalytic domain protein K01278; Psort location: Cytoplasmic, score: 8.96.
  
    0.851
KXB77499.1
KEGG: pdn:HMPREF9137_1236 4.3e-121 putative serine O-acetyltransferase; K00640 serine O-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.849
KXB77500.1
THUMP domain protein; KEGG: pdn:HMPREF9137_1237 6.0e-202 THUMP domain-containing protein; K07444 putative N6-adenine-specific DNA methylase; Psort location: Cytoplasmic, score: 9.97; Belongs to the methyltransferase superfamily.
       0.849
KXB77498.1
KEGG: pit:PIN17_A1539 3.9e-47 low molecular weight phosphotyrosine protein phosphatase; K01104 protein-tyrosine phosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.488
KXB77505.1
KEGG: bhl:Bache_2300 2.3e-83 dihydroorotate oxidase B, electron transfer subunit K02823; Psort location: Cytoplasmic, score: 9.97.
       0.461
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
       0.410
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.