Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
KXB77510.1Auxiliary transport protein, membrane fusion protein family protein; KEGG: pfe:PSF113_5667 1.3e-09 secretion protein family protein K01993. (327 aa)    
Predicted Functional Partners:
KXB77511.1
Psort location: OuterMembrane, score: 9.93.
 
 0.926
KXB77508.1
ABC-2 type transporter; KEGG: phu:Phum_PHUM433630 1.8e-07 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.911
KXB77509.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.911
KXB78783.1
Heavy metal efflux pump, CzcA family; KEGG: dat:HRM2_00450 1.4e-145 rndA; protein RndA K07787; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.816
KXB74226.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; KEGG: pfe:PSF113_1856 1.3e-19 outer membrane pyoverdine eflux protein; Psort location: OuterMembrane, score: 9.92.
 
 0.714
KXB74010.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.620
KXB77512.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.548
KXB77513.1
KEGG: pdn:HMPREF9137_1160 6.5e-228 cydA; cytochrome D ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.546
KXB77514.1
KEGG: pmz:HMPREF0659_A5785 1.4e-170 putative cytochrome D ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.536
KXB74227.1
RND transporter, HAE1 family; KEGG: rcp:RCAP_rcc02895 4.4e-158 mdtF; multidrug resistance protein MdtF K03296; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.497
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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