STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77513.1KEGG: pdn:HMPREF9137_1160 6.5e-228 cydA; cytochrome D ubiquinol oxidase subunit I K00425; Psort location: CytoplasmicMembrane, score: 10.00. (509 aa)    
Predicted Functional Partners:
KXB77514.1
KEGG: pmz:HMPREF0659_A5785 1.4e-170 putative cytochrome D ubiquinol oxidase, subunit II; K00426 cytochrome d ubiquinol oxidase subunit II; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.999
KXB77512.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.842
KXB81736.1
KEGG: pdn:HMPREF9137_0600 0. sdhA; succinate dehydrogenase flavoprotein subunit K00239; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.618
KXB77510.1
Auxiliary transport protein, membrane fusion protein family protein; KEGG: pfe:PSF113_5667 1.3e-09 secretion protein family protein K01993.
 
     0.614
KXB81737.1
KEGG: pdn:HMPREF9137_0601 6.3e-120 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240; Psort location: Cytoplasmic, score: 8.96.
     
 0.594
KXB74240.1
KEGG: pdn:HMPREF9137_0396 9.3e-213 glpA; glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 9.12; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.565
KXB74238.1
KEGG: pdn:HMPREF9137_0394 1.1e-184 glpC; glycerol-3-phosphate dehydrogenase K00113; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.520
KXB77509.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.507
KXB77508.1
ABC-2 type transporter; KEGG: phu:Phum_PHUM433630 1.8e-07 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.486
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
   
  
 0.450
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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