Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB77386.1Hypothetical protein; KEGG: apa:APP7_1825 3.8e-81 Modification methylase AccI; Psort location: Cytoplasmic, score: 8.96. (475 aa)    
Predicted Functional Partners:
KXB79507.1
Hypothetical protein; KEGG: fte:Fluta_2981 1.0e-09 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit.
  
 
 0.776
KXB78902.1
KEGG: hpj:jhp0726 6.5e-86 hsdS_4; type I restriction enzyme (specificity subunit); K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
KXB74244.1
Type I restriction enzyme HsdR protein; KEGG: nth:Nther_0809 3.8e-05 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.508
KXB78904.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.464
KXB77362.1
Hypothetical protein.
       0.415
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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