STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77364.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (188 aa)    
Predicted Functional Partners:
KXB74641.1
Hypothetical protein; KEGG: efc:EFAU004_00580 5.3e-06 ISEfa7, transposase; Psort location: Cytoplasmic, score: 8.96.
 
     0.637
KXB75067.1
Hypothetical protein.
 
     0.628
KXB77362.1
Hypothetical protein.
 
     0.621
KXB77904.1
Hypothetical protein.
 
     0.613
KXB77363.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.572
KXB76507.1
KEGG: efu:HMPREF0351_12109 2.7e-05 TetR/AcrR family transcriptional regulator.
  
     0.537
KXB77785.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.508
KXB78740.1
Hypothetical protein; KEGG: pmh:P9215_00001 0.0050 dnaN; DNA polymerase III subunit beta K02338; Psort location: OuterMembrane, score: 9.52.
  
     0.443
KXB81222.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.52.
  
     0.438
KXB81264.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.430
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.