STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB77262.1Hypothetical protein; KEGG: pmn:PMN2A_1332 0.00016 DNA topoisomerase IV subunit A K02469; Psort location: Cytoplasmic, score: 8.96. (305 aa)    
Predicted Functional Partners:
KXB77261.1
Helicase protein; KEGG: ase:ACPL_5928 1.3e-24 F-box DNA helicase protein 1.
     0.991
KXB78151.1
N-6 DNA Methylase; KEGG: ase:ACPL_5928 1.5e-23 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
     0.974
KXB78152.1
Hypothetical protein; KEGG: ase:ACPL_5928 1.1e-41 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
     0.968
KXB76504.1
Hypothetical protein; KEGG: ase:ACPL_5928 3.0e-32 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
     0.947
KXB78904.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.851
KXB79507.1
Hypothetical protein; KEGG: fte:Fluta_2981 1.0e-09 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit.
  
 
 0.829
KXB78902.1
KEGG: hpj:jhp0726 6.5e-86 hsdS_4; type I restriction enzyme (specificity subunit); K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.829
KXB81226.1
Hypothetical protein; KEGG: ase:ACPL_5928 3.9e-68 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
     0.800
KXB78150.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.795
KXB78147.1
Hypothetical protein.
 
    0.781
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.