Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB77273.1Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.6e-15 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96. (415 aa)    
Predicted Functional Partners:
KXB77274.1
Hypothetical protein.
 
     0.946
KXB77289.1
Conjugative transposon TraM protein.
 
     0.769
KXB77286.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.768
KXB77290.1
Conjugative transposon TraN protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.763
KXB77285.1
Conjugative transposon protein TraI; KEGG: dte:Dester_1111 0.0054 nicotinate-nucleotide pyrophosphorylase K00767.
  
     0.756
KXB78148.1
Hypothetical protein; KEGG: dre:321277 1.0e-07 mybbp1a, cb486, sb:cb486; MYB binding protein (P160) 1a; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.
  
     0.742
KXB77287.1
Conjugative transposon TraK protein.
 
     0.737
KXB77271.1
Hypothetical protein.
 
     0.733
KXB76570.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.723
KXB77293.1
Conjugative transposon protein TraQ family protein.
  
     0.717
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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