Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB77289.1Conjugative transposon TraM protein. (448 aa)    
Predicted Functional Partners:
KXB77287.1
Conjugative transposon TraK protein.
 
     0.912
KXB77290.1
Conjugative transposon TraN protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.909
KXB77285.1
Conjugative transposon protein TraI; KEGG: dte:Dester_1111 0.0054 nicotinate-nucleotide pyrophosphorylase K00767.
 
     0.902
KXB77286.1
Conjugative transposon TraJ protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.858
KXB77293.1
Conjugative transposon protein TraQ family protein.
 
     0.794
KXB77288.1
Hypothetical protein.
       0.793
KXB77294.1
Hypothetical protein; KEGG: pgn:PGN_0055 3.8e-42 lysozyme; K01185 lysozyme.
 
     0.777
KXB78148.1
Hypothetical protein; KEGG: dre:321277 1.0e-07 mybbp1a, cb486, sb:cb486; MYB binding protein (P160) 1a; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.
 
     0.773
KXB78147.1
Hypothetical protein.
  
     0.769
KXB77273.1
Relaxase/mobilization nuclease domain protein; KEGG: tin:Tint_2201 2.6e-15 DNA topoisomerase; Psort location: Cytoplasmic, score: 8.96.
 
     0.769
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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