Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB77292.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (199 aa)    
Predicted Functional Partners:
KXB77293.1
Conjugative transposon protein TraQ family protein.
       0.582
KXB77294.1
Hypothetical protein; KEGG: pgn:PGN_0055 3.8e-42 lysozyme; K01185 lysozyme.
       0.582
KXB77291.1
CHC2 zinc finger domain protein; KEGG: liv:LIV_1412 4.8e-09 dnaG; putative DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
       0.572
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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