Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB77312.1Hypothetical protein. (480 aa)    
Predicted Functional Partners:
KXB77313.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.49.
 
   
 0.939
KXB77309.1
Hypothetical protein.
 
     0.912
KXB77308.1
Hypothetical protein.
 
     0.905
KXB78998.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.896
KXB75667.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.896
KXB77720.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0034 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
 
 
   0.881
KXB75586.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.00055 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.49.
 
 
   0.834
KXB75598.1
Hypothetical protein.
  
 
   0.801
KXB78472.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
  
 
   0.800
KXB77623.1
TonB-dependent receptor plug domain protein; Psort location: OuterMembrane, score: 9.52.
 
   
 0.785
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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