STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76935.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (265 aa)    
Predicted Functional Partners:
KXB76934.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.949
KXB78767.1
Hypothetical protein; KEGG: fnu:FN1512 3.1e-05 phophatidylinositol-4-phosphate 5-kinase.
  
     0.577
KXB82143.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.498
KXB75734.1
OstA-like protein.
  
     0.440
KXB80139.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 3.9e-06 DNA polymerase family B containing protein K02350; Psort location: OuterMembrane, score: 9.52.
  
     0.416
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.