STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76538.1Isoprenylcysteine carboxyl methyltransferase family protein; KEGG: bsu:BSU22040 5.2e-13 ypbQ; hypothetical protein K16168; Psort location: CytoplasmicMembrane, score: 10.00. (205 aa)    
Predicted Functional Partners:
KXB76537.1
Phosphatidylinositol-specific phospholipase C, X domain protein; KEGG: bfr:BF1750 2.4e-27 1-phosphatidylinositol phosphodiesterase; K01771 1-phosphatidylinositol phosphodiesterase.
       0.781
KXB78899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.546
KXB78900.1
Hypothetical protein.
  
     0.465
KXB74319.1
Hypothetical protein; KEGG: sgn:SGRA_3959 0.00020 glycosyl transferase family protein; Psort location: Periplasmic, score: 9.84.
  
     0.453
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.