Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB76504.1Hypothetical protein; KEGG: ase:ACPL_5928 3.0e-32 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96. (417 aa)    
Predicted Functional Partners:
KXB74907.1
Helicase protein; KEGG: ase:ACPL_5928 1.1e-29 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
     0.977
KXB78151.1
N-6 DNA Methylase; KEGG: ase:ACPL_5928 1.5e-23 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
 
     0.976
KXB77261.1
Helicase protein; KEGG: ase:ACPL_5928 1.3e-24 F-box DNA helicase protein 1.
 
     0.976
KXB77262.1
Hypothetical protein; KEGG: pmn:PMN2A_1332 0.00016 DNA topoisomerase IV subunit A K02469; Psort location: Cytoplasmic, score: 8.96.
 
     0.943
KXB76501.1
Hypothetical protein; KEGG: ase:ACPL_5928 7.9e-28 F-box DNA helicase protein 1.
     0.926
KXB79507.1
Hypothetical protein; KEGG: fte:Fluta_2981 1.0e-09 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit.
  
 
 0.776
KXB78902.1
KEGG: hpj:jhp0726 6.5e-86 hsdS_4; type I restriction enzyme (specificity subunit); K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.776
KXB76503.1
KEGG: ova:OBV_44960 1.4e-154 group II intron-encoded protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.775
KXB76502.1
Hypothetical protein.
       0.518
KXB74244.1
Type I restriction enzyme HsdR protein; KEGG: nth:Nther_0809 3.8e-05 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.508
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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