Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB76345.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (147 aa)    
Predicted Functional Partners:
KXB76499.1
Hypothetical protein; KEGG: blf:BLIF_1156 0.0053 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.770
KXB81224.1
Hypothetical protein; KEGG: rho:RHOM_08580 0.00027 DNA topoisomerase; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 8.96.
  
     0.769
KXB76634.1
Conjugative transposon protein TraQ.
  
     0.767
KXB74857.1
Conjugative transposon protein TraQ.
  
     0.767
KXB76516.1
Hypothetical protein.
  
     0.764
KXB74842.1
Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.764
KXB76566.1
Conjugative transposon protein TraA family protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.761
KXB74856.1
Conjugative transposon protein TraO.
  
     0.761
KXB76635.1
Conjugative transposon protein TraO.
  
     0.759
KXB76541.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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