Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB76242.1OmpA family protein; KEGG: pfe:PSF113_0716 0.0018 yfiB; protein YfiB. (230 aa)    
Predicted Functional Partners:
KXB76231.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.878
KXB76241.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.796
KXB76243.1
Hypothetical protein; KEGG: bya:BANAU_3017 5.1e-05 mcpA; methyl-accepting chemotaxis protein McpA K03406; Psort location: Extracellular, score: 9.64.
     
 0.788
KXB76240.1
Hypothetical protein; KEGG: epy:EpC_05910 7.4e-06 Non-specific serine/threonine protein kinase; Psort location: Cytoplasmic, score: 8.96.
       0.775
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
   0.664
KXB74998.1
Hypothetical protein.
   
 
 0.641
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.636
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.626
KXB79459.1
Hypothetical protein.
  
 
 0.615
KXB79922.1
KEGG: rcp:RCAP_rcc01550 2.1e-21 M23 family peptidase; Psort location: OuterMembrane, score: 9.93.
   
 0.590
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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