Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB76233.1Peptidase, S41 family; KEGG: kse:Ksed_08930 3.3e-12 periplasmic protease; K03797 carboxyl-terminal processing protease. (334 aa)    
Predicted Functional Partners:
KXB76234.1
Hypothetical protein.
 
    0.916
KXB76235.1
KEGG: pmz:HMPREF0659_A6144 0. DNA gyrase/topoisomerase IV, A subunit; K02621 topoisomerase IV subunit A; Psort location: Cytoplasmic, score: 9.97.
       0.820
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.664
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.662
KXB78297.1
Hypothetical protein.
  
   
 0.611
KXB78289.1
Sodium bile acid symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.500
KXB74192.1
Sporulation and cell division repeat protein.
  
     0.422
KXB76236.1
KEGG: pdn:HMPREF9137_0447 2.7e-110 AhpC/TSA family antioxidant; Psort location: Cytoplasmic, score: 8.96.
  
    0.421
KXB78460.1
Tetratricopeptide repeat protein; KEGG: sgn:SGRA_3959 0.00072 glycosyl transferase family protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
   0.413
KXB74999.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 4.6e-12 DNA polymerase family B containing protein K02350; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.413
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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