STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76233.1Peptidase, S41 family; KEGG: kse:Ksed_08930 3.3e-12 periplasmic protease; K03797 carboxyl-terminal processing protease. (334 aa)    
Predicted Functional Partners:
KXB76234.1
Hypothetical protein.
 
    0.929
KXB76235.1
KEGG: pmz:HMPREF0659_A6144 0. DNA gyrase/topoisomerase IV, A subunit; K02621 topoisomerase IV subunit A; Psort location: Cytoplasmic, score: 9.97.
       0.849
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
   
   0.686
KXB78297.1
Hypothetical protein.
  
     0.609
KXB78289.1
Sodium bile acid symporter family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.500
KXB78999.1
Hypothetical protein.
   
   0.470
KXB79003.1
Hypothetical protein.
   
   0.470
KXB78470.1
Hypothetical protein.
   
   0.470
KXB78240.1
SusD family protein.
   
   0.470
KXB77719.1
Hypothetical protein.
   
   0.470
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.