Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB76236.1KEGG: pdn:HMPREF9137_0447 2.7e-110 AhpC/TSA family antioxidant; Psort location: Cytoplasmic, score: 8.96. (330 aa)    
Predicted Functional Partners:
KXB76237.1
Mg chelatase-like protein; KEGG: ccm:Ccan_16640 1.5e-166 competence protein comM K07391; Psort location: Cytoplasmic, score: 9.97.
       0.820
KXB80600.1
Hypothetical protein; KEGG: pyo:PY00139 0.00064 erythrocyte membrane protein; K09561 STIP1 homology and U-box containing protein 1; Psort location: OuterMembrane, score: 9.49.
  
     0.756
KXB79154.1
Hypothetical protein; KEGG: zga:zobellia_4408 0.0034 thiol-disulfide oxidoreductase.
  
     0.756
KXB80387.1
Hypothetical protein.
  
     0.727
KXB78066.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.725
KXB76234.1
Hypothetical protein.
 
     0.723
KXB79959.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0079 1.2e-299 hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: OuterMembrane, score: 9.49.
 
 
 
 0.715
KXB74998.1
Hypothetical protein.
  
     0.706
KXB74186.1
Hypothetical protein.
  
     0.660
KXB80098.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.658
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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