STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB76226.1Hypothetical protein; KEGG: wbr:WGLp382 0.00038 lpxD; hypothetical protein; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Psort location: Cytoplasmic, score: 8.96. (618 aa)    
Predicted Functional Partners:
KXB76225.1
KEGG: pmz:HMPREF0659_A6520 0. peptidase M16 inactive domain protein; Belongs to the peptidase M16 family.
       0.816
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
    0.761
KXB78123.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.720
KXB76224.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.719
KXB81973.1
KEGG: pdn:HMPREF9137_1300 1.4e-184 rffG; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 8.96; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.707
KXB76000.1
Tetratricopeptide repeat protein.
 
     0.688
KXB77801.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.681
KXB74014.1
Hypothetical protein; KEGG: zga:zobellia_2222 1.8e-60 galF; UTP-glucose-1-phosphate uridylyltransferase.
  
 
 0.681
KXB74258.1
Hypothetical protein; KEGG: cmr:Cycma_3710 1.7e-32 hypothetical protein; K12582 TDP-Fuc4NAc transferase; Psort location: Cytoplasmic, score: 8.96.
  
 0.656
KXB74161.1
KEGG: nmh:NMBH4476_0274 4.2e-12 phosphotransferase family protein K07102; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.655
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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