STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75994.1KEGG: osp:Odosp_0584 6.7e-84 Aminodeoxychorismate synthase K01665; Psort location: Cytoplasmic, score: 9.97. (324 aa)    
Predicted Functional Partners:
KXB75995.1
KEGG: pit:PIN17_A1708 2.1e-41 glutamine amidotransferase; K01658 anthranilate synthase component II; Psort location: Cytoplasmic, score: 9.26.
 0.999
KXB74201.1
KEGG: pru:PRU_1458 1.7e-62 trpC; indole-3-glycerol phosphate synthase K01609; Psort location: Cytoplasmic, score: 9.97.
 
 0.995
KXB81941.1
KEGG: bth:BT_0768 1.8e-35 hypothetical protein; K02619 4-amino-4-deoxychorismate lyase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.955
trpF
KEGG: pmz:HMPREF0659_A5926 6.9e-50 putative N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the TrpF family.
 
 
 0.928
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
 
 
 0.844
KXB79166.1
KEGG: pdn:HMPREF9137_1471 1.2e-157 putative 3-deoxy-7-phosphoheptulonate synthase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.835
KXB78449.1
KEGG: pit:PIN17_A1106 2.8e-85 isochorismate synthase K02361.
  
  
0.712
KXB79096.1
KEGG: pdn:HMPREF9137_0102 3.0e-104 putative shikimate dehydrogenase; K00014 shikimate dehydrogenase; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.681
KXB77819.1
Dihydropteroate synthase; KEGG: pdn:HMPREF9137_0315 1.5e-102 folP; dihydropteroate synthase K00796; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.641
KXB74291.1
KEGG: pdn:HMPREF9137_2315 1.2e-98 putative histidinol-phosphate transaminase; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.615
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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