STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75997.1Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 1.9e-07 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96. (268 aa)    
Predicted Functional Partners:
KXB75998.1
Zinc ribbon domain protein; KEGG: rba:RB6605 7.0e-13 phospholipase C-beta-2; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.914
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.888
KXB74291.1
KEGG: pdn:HMPREF9137_2315 1.2e-98 putative histidinol-phosphate transaminase; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.759
folE
KEGG: pit:PIN17_A1905 1.7e-87 folE; GTP cyclohydrolase I K01495; Psort location: Cytoplasmic, score: 9.97.
    
 0.732
KXB79506.1
Pyruvate kinase; KEGG: pdn:HMPREF9137_0096 1.9e-189 pyk; pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
   
 0.633
KXB81388.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
  0.602
KXB79945.1
KEGG: pmz:HMPREF0659_A5483 4.5e-39 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950; Psort location: Cytoplasmic, score: 9.26.
    
  0.600
KXB78118.1
Hypothetical protein; KEGG: pmz:HMPREF0659_A5890 3.0e-26 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
    
  0.600
KXB79150.1
Putative GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
  0.568
KXB79008.1
RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
 
  0.568
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.