STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75999.1KEGG: bsa:Bacsa_2689 5.7e-55 Enoyl-CoA hydratase. (154 aa)    
Predicted Functional Partners:
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.927
KXB78436.1
Putative serine protease MucD; KEGG: pdn:HMPREF9137_1111 7.3e-213 peptidase Do; Psort location: Periplasmic, score: 10.00.
    
  0.913
KXB81963.1
Hypothetical protein.
  
   0.729
KXB79010.1
KEGG: pru:PRU_2034 8.8e-240 acyl-CoA dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 0.725
KXB74180.1
KEGG: pmz:HMPREF0659_A6881 1.9e-269 carboxyl transferase domain protein; K01966 propionyl-CoA carboxylase beta chain; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.615
KXB77815.1
Putative FeS assembly SUF system protein; KEGG: lru:HMPREF0538_22161 4.8e-19 yitW2; N-6 adenine-specific DNA methylase YitW; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.602
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.601
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
     
 0.596
KXB77772.1
KEGG: pdn:HMPREF9137_0543 0. 2-oxoacid:acceptor oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
     
 0.583
KXB75592.1
AMP-binding enzyme; KEGG: pdn:HMPREF9137_0351 1.9e-253 AMP-binding protein; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.556
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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