Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB76008.1Resolvase protein; KEGG: ebe:B21_00855 0.0019 ybl51; ybl51; Psort location: Cytoplasmic, score: 8.96. (216 aa)    
Predicted Functional Partners:
KXB76009.1
Hypothetical protein; KEGG: apa:APP7_1825 1.1e-06 Modification methylase AccI.
       0.773
KXB80111.1
Hypothetical protein.
 
     0.557
KXB82137.1
ROK family protein; KEGG: pdn:HMPREF9137_1347 3.0e-143 putative glucokinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.26.
     
  0.500
KXB78892.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.428
KXB79708.1
Hypothetical protein; KEGG: nth:Nther_0809 3.3e-09 LexA repressor; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.412
KXB76011.1
Hypothetical protein; KEGG: fbr:FBFL15_0121 4.1e-52 putative type II endonuclease-methyltransferase fusion protein; Psort location: OuterMembrane, score: 9.49.
  
     0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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