Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB76011.1Hypothetical protein; KEGG: fbr:FBFL15_0121 4.1e-52 putative type II endonuclease-methyltransferase fusion protein; Psort location: OuterMembrane, score: 9.49. (1267 aa)    
Predicted Functional Partners:
KXB76012.1
Helicase protein; KEGG: atm:ANT_21200 3.0e-67 putative ATP-dependent helicase; Psort location: Cytoplasmic, score: 8.96.
 
     0.871
KXB76010.1
Hypothetical protein.
      
0.773
KXB74116.1
N-6 DNA Methylase; KEGG: fbr:FBFL15_2133 4.5e-142 putative modification methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.604
KXB76008.1
Resolvase protein; KEGG: ebe:B21_00855 0.0019 ybl51; ybl51; Psort location: Cytoplasmic, score: 8.96.
  
     0.403
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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