Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
KXB75666.1SusD family protein; Psort location: Cytoplasmic, score: 8.96. (468 aa)    
Predicted Functional Partners:
KXB75667.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.981
KXB75586.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.00055 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.49.
 
 
   0.903
KXB78998.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
 
   0.815
KXB75585.1
SusD family protein.
  
 
   0.769
KXB77720.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0034 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
 
 
   0.766
KXB77312.1
Hypothetical protein.
  
     0.764
KXB78239.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.0064 sulfate/thiosulfate import ATP-binding protein CysA; Psort location: OuterMembrane, score: 9.52.
 
   
 0.763
KXB75663.1
Hypothetical protein.
 
     0.763
KXB75664.1
Peptidase M16 inactive domain protein; KEGG: bfg:BF638R_3469 1.6e-162 putative peptidase; K07263 zinc protease; Belongs to the peptidase M16 family.
       0.759
KXB75665.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.759
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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