Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB75667.1TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49. (1013 aa)    
Predicted Functional Partners:
KXB75666.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.981
KXB78240.1
SusD family protein.
 
 
   0.912
KXB77624.1
Hypothetical protein.
 
 
   0.899
KXB77312.1
Hypothetical protein.
 
 
   0.896
KXB78999.1
Hypothetical protein.
 
 
   0.767
KXB75664.1
Peptidase M16 inactive domain protein; KEGG: bfg:BF638R_3469 1.6e-162 putative peptidase; K07263 zinc protease; Belongs to the peptidase M16 family.
  
    0.755
KXB75663.1
Hypothetical protein.
 
     0.751
KXB75665.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.742
KXB75668.1
KEGG: mmh:Mmah_1410 1.3e-11 sirohydrochlorin cobaltochelatase K03795.
 
     0.729
KXB80132.1
TonB-dependent receptor; KEGG: hip:CGSHiEE_01810 2.4e-07 bcp; TonB K03832; Psort location: Periplasmic, score: 9.83.
 
 0.706
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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