STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75668.1KEGG: mmh:Mmah_1410 1.3e-11 sirohydrochlorin cobaltochelatase K03795. (284 aa)    
Predicted Functional Partners:
KXB75667.1
TonB-dependent receptor; Psort location: OuterMembrane, score: 9.49.
 
     0.771
KXB75666.1
SusD family protein; Psort location: Cytoplasmic, score: 8.96.
       0.728
KXB75664.1
Peptidase M16 inactive domain protein; KEGG: bfg:BF638R_3469 1.6e-162 putative peptidase; K07263 zinc protease; Belongs to the peptidase M16 family.
  
    0.703
KXB75665.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.691
KXB75663.1
Hypothetical protein.
       0.676
KXB75669.1
Leucine Rich repeat-containing domain protein; KEGG: ctc:CTC00520 6.2e-07 cwp66 homolog/N-acetylmuramoyl-L-alanine amidase K01446.
       0.590
KXB80419.1
uroporphyrinogen-III synthase; KEGG: pdn:HMPREF9137_0433 2.5e-107 hemD; uroporphyrinogen-III synthase K01719; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.589
KXB81394.1
KEGG: pit:PIN17_A0657 5.5e-105 ribD; riboflavin biosynthesis protein RibD K11752; Psort location: Cytoplasmic, score: 9.97.
      
 0.408
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.