STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75672.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
KXB77266.1
Sigma-54 interaction domain protein; KEGG: pfe:PSF113_0046 1.1e-65 algB; protein AlgB; Psort location: Cytoplasmic, score: 9.97.
   
 0.735
KXB74217.1
Sigma-54 interaction domain protein; KEGG: pfe:PSF113_3093 7.0e-58 transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; Psort location: Cytoplasmic, score: 9.97.
   
 0.683
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.660
KXB80817.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bvu:BVU_4096 1.2e-95 two-component system sensor histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.646
KXB77223.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfr:BF0210 3.3e-146 two-component system sensor histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.646
KXB78441.1
Transcriptional regulatory protein RprY; KEGG: ava:Ava_1878 4.4e-32 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
   
 0.592
KXB77265.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: zga:zobellia_1342 6.0e-50 two-component system hybrid-sensor histidine kinase/response regulator, receiver domain; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.592
KXB77222.1
Putative transcriptional regulatory protein CusR; KEGG: cnc:CNE_2c16400 2.7e-41 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
   
 0.592
KXB74216.1
Putative transcriptional regulatory protein ResD; KEGG: chu:CHU_3042 1.4e-37 two-component response regulator K07658; Psort location: Cytoplasmic, score: 9.97.
   
 0.592
KXB78440.1
KEGG: pdn:HMPREF9137_0202 1.0e-229 ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.534
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.