Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB75682.1Ribosomal subunit interface protein. (113 aa)    
Predicted Functional Partners:
rpsU
Ribosomal protein S21; KEGG: smh:DMIN_01740 3.6e-08 30S ribosomal protein S21/signal peptidase I K03100; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.954
KXB75683.1
Putative tyrosine recombinase XerC; KEGG: bsr:I33_1800 2.7e-39 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
 
    0.944
rplQ
Ribosomal protein L17; KEGG: apb:SAR116_2416 7.5e-21 50S ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.97.
 
 
   0.884
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 2.4e-24 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.879
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
  
 
   0.879
rpmA
Ribosomal protein L27; KEGG: pfe:PSF113_5049 1.2e-20 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.879
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
 
 0.877
rpmH
Ribosomal protein L34; KEGG: rri:A1G_05155 1.6e-09 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL34 family.
   
 
 0.874
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.869
rpmE2
Ribosomal protein L31; KEGG: apb:SAR116_2278 1.4e-05 50S ribosomal protein L31 K02909.
   
 
 0.869
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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