STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75686.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
KXB75690.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
 
   0.770
KXB74968.1
KEGG: ava:Ava_2028 0.00067 two component LuxR family transcriptional regulator.
  
     0.743
KXB75685.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.661
KXB81943.1
Tetratricopeptide repeat domain protein; KEGG: ccm:Ccan_18230 2.0e-91 PIF1/RRM3 DNA helicase-like protein; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.634
rpsU
Ribosomal protein S21; KEGG: smh:DMIN_01740 3.6e-08 30S ribosomal protein S21/signal peptidase I K03100; Belongs to the bacterial ribosomal protein bS21 family.
       0.623
KXB80817.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bvu:BVU_4096 1.2e-95 two-component system sensor histidine kinase; K02484 two-component system, OmpR family, sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.616
KXB77223.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bfr:BF0210 3.3e-146 two-component system sensor histidine kinase; K00936; Psort location: CytoplasmicMembrane, score: 9.99.
   
 0.616
KXB78292.1
Tetratricopeptide repeat protein; KEGG: apb:SAR116_1534 1.5e-05 hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 0.588
KXB78740.1
Hypothetical protein; KEGG: pmh:P9215_00001 0.0050 dnaN; DNA polymerase III subunit beta K02338; Psort location: OuterMembrane, score: 9.52.
  
 
   0.574
KXB75687.1
Hypothetical protein.
       0.549
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.