Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB75687.1 | KXB75688.1 | HMPREF1860_01728 | HMPREF1860_01729 | Hypothetical protein. | Hypothetical protein. | 0.455 |
KXB75688.1 | KXB75687.1 | HMPREF1860_01729 | HMPREF1860_01728 | Hypothetical protein. | Hypothetical protein. | 0.455 |
KXB75688.1 | KXB75689.1 | HMPREF1860_01729 | HMPREF1860_01730 | Hypothetical protein. | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | 0.592 |
KXB75688.1 | KXB75690.1 | HMPREF1860_01729 | HMPREF1860_01731 | Hypothetical protein. | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | 0.573 |
KXB75688.1 | KXB75691.1 | HMPREF1860_01729 | HMPREF1860_01732 | Hypothetical protein. | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | 0.569 |
KXB75688.1 | KXB75692.1 | HMPREF1860_01729 | HMPREF1860_01733 | Hypothetical protein. | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | 0.434 |
KXB75689.1 | KXB75688.1 | HMPREF1860_01730 | HMPREF1860_01729 | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein. | 0.592 |
KXB75689.1 | KXB75690.1 | HMPREF1860_01730 | HMPREF1860_01731 | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | 0.748 |
KXB75689.1 | KXB75691.1 | HMPREF1860_01730 | HMPREF1860_01732 | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | 0.742 |
KXB75689.1 | KXB75692.1 | HMPREF1860_01730 | HMPREF1860_01733 | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | 0.556 |
KXB75690.1 | KXB75688.1 | HMPREF1860_01731 | HMPREF1860_01729 | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | Hypothetical protein. | 0.573 |
KXB75690.1 | KXB75689.1 | HMPREF1860_01731 | HMPREF1860_01730 | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | 0.748 |
KXB75690.1 | KXB75691.1 | HMPREF1860_01731 | HMPREF1860_01732 | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | 0.768 |
KXB75690.1 | KXB75692.1 | HMPREF1860_01731 | HMPREF1860_01733 | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | 0.572 |
KXB75691.1 | KXB75688.1 | HMPREF1860_01732 | HMPREF1860_01729 | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | Hypothetical protein. | 0.569 |
KXB75691.1 | KXB75689.1 | HMPREF1860_01732 | HMPREF1860_01730 | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | 0.742 |
KXB75691.1 | KXB75690.1 | HMPREF1860_01732 | HMPREF1860_01731 | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | Hypothetical protein; Psort location: OuterMembrane, score: 9.49. | 0.768 |
KXB75691.1 | KXB75692.1 | HMPREF1860_01732 | HMPREF1860_01733 | Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147. | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | 0.799 |
KXB75692.1 | KXB75688.1 | HMPREF1860_01733 | HMPREF1860_01729 | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | Hypothetical protein. | 0.434 |
KXB75692.1 | KXB75689.1 | HMPREF1860_01733 | HMPREF1860_01730 | Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. | Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. | 0.556 |
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