Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB75689.1Radical SAM domain protein; KEGG: cti:RALTA_B0668 2.8e-05 pqqE1; pyrroloquinoline quinone biosynthesis protein pqqe K06139; Psort location: Cytoplasmic, score: 8.96. (486 aa)    
Predicted Functional Partners:
KXB75690.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
       0.746
KXB75691.1
Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147.
       0.741
KXB75688.1
Hypothetical protein.
       0.592
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.580
KXB75692.1
Hypothetical protein; KEGG: osp:Odosp_0369 3.3e-50 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82.
       0.555
KXB81388.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.498
KXB75693.1
Hypothetical protein.
       0.458
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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