STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75710.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.973
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.898
KXB75711.1
Sigma-70 region 2; KEGG: ccm:Ccan_05890 5.3e-20 putative RNA polymerase sigma factor rfaY K03088; Psort location: Cytoplasmic, score: 9.26; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.890
KXB80394.1
PAP2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.756
KXB79959.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0079 1.2e-299 hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D; Psort location: OuterMembrane, score: 9.49.
 
   0.740
KXB79154.1
Hypothetical protein; KEGG: zga:zobellia_4408 0.0034 thiol-disulfide oxidoreductase.
  
    0.735
KXB79138.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.732
KXB74268.1
Gliding motility-associated lipoprotein GldH.
  
     0.729
KXB74390.1
KEGG: cyb:CYB_1515 0.0010 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
  
     0.727
KXB78747.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.718
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.