STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75723.1KEGG: apb:SAR116_0014 2.7e-174 FeS assembly protein SufB K09014. (481 aa)    
Predicted Functional Partners:
KXB75724.1
FeS assembly ATPase SufC; KEGG: ccm:Ccan_19350 3.9e-79 putative ATP-dependent transporter sufC K09013; Psort location: Cytoplasmic, score: 9.97.
 
 0.998
KXB75726.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.974
KXB75725.1
FeS assembly protein SufD; KEGG: apb:SAR116_0016 2.3e-24 Fe-S center production/stability protein SufD K09015; Psort location: Cytoplasmic, score: 8.96.
 
   
0.759
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
     
 0.710
KXB80427.1
Fe-S metabolism associated domain protein; KEGG: vvu:VV1_1803 9.3e-23 csdE; cysteine desulfurase K02426; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.619
rimP
Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.613
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
       0.613
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.480
KXB79587.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.457
KXB77815.1
Putative FeS assembly SUF system protein; KEGG: lru:HMPREF0538_22161 4.8e-19 yitW2; N-6 adenine-specific DNA methylase YitW; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.409
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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