STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75733.1KEGG: pdn:HMPREF9137_0249 3.3e-194 PPIC-type PPIASE domain-containing protein; K03771 peptidyl-prolyl cis-trans isomerase SurA. (485 aa)    
Predicted Functional Partners:
KXB75734.1
OstA-like protein.
 
   
 0.902
KXB75732.1
KEGG: pmz:HMPREF0659_A6174 3.4e-48 PPIC-type PPIASE domain protein; K03770 peptidyl-prolyl cis-trans isomerase D.
 
     0.874
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
   
   0.830
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.825
KXB78962.1
Outer membrane protein assembly complex, YaeT protein; KEGG: apb:SAR116_0511 3.2e-18 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
 
 0.768
KXB75735.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.727
KXB80145.1
Outer membrane assembly lipoprotein YfiO.
  
   
 0.720
KXB79622.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
 
  
 0.672
KXB74153.1
Permease, YjgP/YjgQ family; KEGG: hiq:CGSHiGG_02270 0.0013 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K07091; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.629
KXB79960.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.610
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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