STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75624.1Transcriptional regulator, LacI family; KEGG: fjo:Fjoh_1259 5.9e-53 alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97. (350 aa)    
Predicted Functional Partners:
KXB75628.1
Alpha amylase, catalytic domain protein; KEGG: pru:PRU_2700 2.2e-213 neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.754
KXB75622.1
SusD family protein.
 
     0.748
KXB75623.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.00067 sulfate/thiosulfate import ATP-binding protein CysA.
 
     0.734
KXB75625.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.731
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.697
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
   0.688
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.687
KXB80412.1
Kinase, PfkB family; KEGG: pmz:HMPREF0659_A5106 2.0e-116 kinase, PfkB family; K00847 fructokinase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.686
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.685
pheT
KEGG: pmz:HMPREF0659_A6941 0. pheT; phenylalanine--tRNA ligase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.685
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.