STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75625.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (442 aa)    
Predicted Functional Partners:
KXB75628.1
Alpha amylase, catalytic domain protein; KEGG: pru:PRU_2700 2.2e-213 neopullulanase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.788
KXB75624.1
Transcriptional regulator, LacI family; KEGG: fjo:Fjoh_1259 5.9e-53 alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.731
KXB75626.1
KEGG: pdn:HMPREF9137_0726 0. putative 4-alpha-glucanotransferase; K00705 4-alpha-glucanotransferase; Psort location: Cytoplasmic, score: 9.97.
 
     0.694
KXB75622.1
SusD family protein.
 
     0.639
KXB80410.1
Hypothetical protein; KEGG: zga:zobellia_368 2.6e-256 susB; alpha-glucosidase; Psort location: Cytoplasmic, score: 8.96.
 
     0.608
KXB75623.1
TonB-dependent receptor plug domain protein; KEGG: ccv:CCV52592_1977 0.00067 sulfate/thiosulfate import ATP-binding protein CysA.
 
     0.600
KXB75627.1
Pullulanase, type I; KEGG: pmz:HMPREF0659_A5154 2.5e-274 pulA; pullulanase, type I K01200; Belongs to the glycosyl hydrolase 13 family.
 
     0.525
KXB81388.1
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.512
KXB75621.1
Hypothetical protein.
 
     0.461
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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