Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB75539.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
KXB75472.1
Hypothetical protein.
 
     0.866
KXB76344.1
DNA binding domain, excisionase family; KEGG: stq:Spith_0340 0.0022 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component.
 
     0.773
KXB78162.1
DNA binding domain, excisionase family; KEGG: stq:Spith_0340 0.0017 putative PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component.
 
     0.769
KXB78030.1
Pyruvate synthase; KEGG: pdn:HMPREF9137_1524 0. nifJ; pyruvate synthase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.681
KXB78145.1
Hypothetical protein.
  
     0.527
KXB74123.1
Peptidase, M23 family; KEGG: zga:zobellia_3141 1.1e-53 metallopeptidase.
  
     0.481
KXB78144.1
DNA binding domain, excisionase family; KEGG: ptm:GSPATT00015437001 0.0014 hypothetical protein; K07953 GTP-binding protein SAR1.
 
     0.473
KXB76345.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.468
KXB78005.1
Hypothetical protein; KEGG: pha:PSHAa0816 0.0011 partitioning protein A K03496; Psort location: Cytoplasmic, score: 8.96.
  
     0.462
KXB76224.1
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.458
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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