STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB75163.1Hypothetical protein; KEGG: apb:SAR116_0647 5.1e-22 organic solvents resistance ABC transporter K02066; Psort location: CytoplasmicMembrane, score: 10.00. (248 aa)    
Predicted Functional Partners:
KXB75164.1
ABC transporter, ATP-binding protein; KEGG: bsa:Bacsa_3063 1.5e-86 Phosphonate-transporting ATPase K02065; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.998
KXB79144.1
Hypothetical protein.
 
 0.986
KXB75162.1
KEGG: pdn:HMPREF9137_0266 3.9e-127 ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
 
  
  0.868
KXB80424.1
KEGG: pmz:HMPREF0659_A6394 1.8e-280 putative Lipid A export ATP-binding/permease protein MsbA; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.671
KXB79893.1
ABC transporter, ATP-binding protein; KEGG: pah:Poras_1381 2.1e-142 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.671
KXB79894.1
ABC transporter, ATP-binding protein; KEGG: tbe:Trebr_1031 8.2e-134 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.671
KXB79917.1
ABC transporter, ATP-binding protein; KEGG: tnr:Thena_1393 6.7e-52 xenobiotic-transporting ATPase K11085; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.671
KXB75691.1
Hypothetical protein; KEGG: osp:Odosp_0369 5.1e-07 Xenobiotic-transporting ATPase K06147.
  
   0.671
KXB74211.1
Hypothetical protein; KEGG: dmu:Desmu_1037 0.0084 peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type; Psort location: Cytoplasmic, score: 8.96.
  
   0.671
KXB78962.1
Outer membrane protein assembly complex, YaeT protein; KEGG: apb:SAR116_0511 3.2e-18 surface antigen D15 K07277; Psort location: OuterMembrane, score: 10.00.
 
     0.497
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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