Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB75103.1Hypothetical protein; Psort location: Extracellular, score: 9.64. (533 aa)    
Predicted Functional Partners:
KXB75104.1
Hypothetical protein; KEGG: pyo:PY01606 0.0015 gamma-glutamylcysteine synthetase; K11204 glutamate--cysteine ligase catalytic subunit; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB75105.1
Hypothetical protein; KEGG: bqy:MUS_1261 2.1e-09 transglycosylase; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXB75102.1
Hypothetical protein; Psort location: Extracellular, score: 9.64.
       0.743
KXB78242.1
KEGG: pdn:HMPREF9137_0969 0. peptidase, S8/S53 family; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S8 family.
   
 0.721
KXB75101.1
Hypothetical protein.
       0.676
KXB80596.1
Putative stage III sporulation protein E; KEGG: apb:SAR116_1808 5.5e-89 DNA segregation ATPase FtsK/SpoIIIE K03466; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.644
KXB75100.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.595
KXB75106.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.553
KXB74178.1
Zinc-dependent metalloproteinase lipoprotein, BF0631 family.
    
  0.484
KXB75621.1
Hypothetical protein.
  
 0.454
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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