STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB74946.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
KXB78730.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.731
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 
 0.715
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.684
KXB79112.1
UvrD/REP helicase; KEGG: pmz:HMPREF0659_A6530 7.4e-291 UvrD/REP helicase K03657; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.664
KXB81327.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
KXB79703.1
Hypothetical protein; KEGG: lpl:lp_1963 0.0018 dnaG; DNA primase DnaG; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
KXB78898.1
CHC2 zinc finger domain protein; KEGG: bfa:Bfae_16970 9.0e-09 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
KXB78899.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
KXB78908.1
Toprim domain protein; KEGG: ccv:CCV52592_2069 0.0045 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
KXB78188.1
Hypothetical protein; KEGG: cow:Calow_0581 0.00028 DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 8.96.
  
  0.656
Your Current Organism:
Prevotella amnii
NCBI taxonomy Id: 419005
Other names: CCUG 53648, DSM 23384, JCM 14753, P. amnii, Prevotella amnii Lawson et al. 2008 emend. Hahnke et al. 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.